J4_9SYR_003

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

9SYR|1|L1|G|1271, 9SYR|1|L1|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|C|981
9SYR|1|L1|U|982
9SYR|1|L1|C|983
*
9SYR|1|L1|G|1070
9SYR|1|L1|C|1071
9SYR|1|L1|C|1072
*
9SYR|1|L1|G|1240
9SYR|1|L1|C|1241
9SYR|1|L1|G|1242
9SYR|1|L1|C|1243
*
9SYR|1|L1|G|1268
9SYR|1|L1|G|1269
9SYR|1|L1|A|1270
9SYR|1|L1|G|1271
9SYR|1|L1|C|1272
9SYR|1|L1|G|1273

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LI

Large ribosomal subunit protein uL30

Chain Le

Large ribosomal subunit protein eL6

Chain Ls

60S ribosomal protein L29