J4_9SYR_008

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9SYR|1|L1|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|G|2618
9SYR|1|L1|G|2619
*
9SYR|1|L1|U|2637
9SYR|1|L1|G|2638
9SYR|1|L1|U|2639
9SYR|1|L1|G|2640
9SYR|1|L1|A|2641
9SYR|1|L1|A|2642
*
9SYR|1|L1|U|2692
9SYR|1|L1|G|2693
9SYR|1|L1|G|2694
9SYR|1|L1|A|2695
9SYR|1|L1|A|2696
9SYR|1|L1|A|2697
9SYR|1|L1|G|2698
*
9SYR|1|L1|U|2718
9SYR|1|L1|C|2719

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L38

Chain Li

60S ribosomal protein L19

Chain Ll

60S ribosomal protein L22

Chain Lx

60S ribosomal protein L34