J4_9T0Y_001

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

9T0Y|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|A|G|115
9T0Y|1|A|A|116
9T0Y|1|A|G|117
9T0Y|1|A|U|118
9T0Y|1|A|A|119
9T0Y|1|A|A|120
9T0Y|1|A|U|121
9T0Y|1|A|G|122
*
9T0Y|1|A|U|239
9T0Y|1|A|G|240
*
9T0Y|1|A|C|286
9T0Y|1|A|U|287
9T0Y|1|A|A|288
9T0Y|1|A|G|289
*
9T0Y|1|A|C|311
9T0Y|1|A|C|312

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17