J4_9T0Y_002

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9T0Y|1|A|C|183

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|A|G|142
9T0Y|1|A|A|143
9T0Y|1|A|G|144
*
9T0Y|1|A|C|178
9T0Y|1|A|A|179
9T0Y|1|A|U|180
9T0Y|1|A|A|181
9T0Y|1|A|A|182
9T0Y|1|A|C|183
9T0Y|1|A|G|184
*
9T0Y|1|A|C|193
9T0Y|1|A|C|194
9T0Y|1|A|A|195
9T0Y|1|A|A|196
9T0Y|1|A|A|197
9T0Y|1|A|G|198
*
9T0Y|1|A|U|219
9T0Y|1|A|G|220
9T0Y|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20