J4_9T4R_013
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAG*CGAAAG
- Length
- 21 nucleotides
- Bulged bases
- 9T4R|1|a|A|1996
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9T4R|1|a|C|1858
9T4R|1|a|U|1859
9T4R|1|a|G|1860
*
9T4R|1|a|C|1930
9T4R|1|a|G|1931
*
9T4R|1|a|C|1949
9T4R|1|a|C|1950
9T4R|1|a|U|1951
9T4R|1|a|A|1952
9T4R|1|a|A|1953
9T4R|1|a|G|1954
9T4R|1|a|G|1955
9T4R|1|a|U|1956
9T4R|1|a|A|1957
9T4R|1|a|G|1958
*
9T4R|1|a|C|1992
9T4R|1|a|G|1993
9T4R|1|a|A|1994
9T4R|1|a|A|1995
9T4R|1|a|A|1996
9T4R|1|a|G|1997
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Z
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: