J4_9T6M_005

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GGAAG*CGCG*CAG*CGUAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|G|297
9T6M|1|a|G|298
9T6M|1|a|A|299
9T6M|1|a|A|300
9T6M|1|a|G|301
*
9T6M|1|a|C|316
9T6M|1|a|G|317
9T6M|1|a|C|318
9T6M|1|a|G|319
*
9T6M|1|a|C|323
9T6M|1|a|A|324
9T6M|1|a|G|325
*
9T6M|1|a|C|337
9T6M|1|a|G|338
9T6M|1|a|U|339
9T6M|1|a|A|340
9T6M|1|a|C|341

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain t

Large ribosomal subunit protein uL24