J4_9T6M_009

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

9T6M|1|a|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|U|1313
9T6M|1|a|C|1314
*
9T6M|1|a|G|1338
9T6M|1|a|G|1339
9T6M|1|a|U|1340
9T6M|1|a|G|1341
9T6M|1|a|A|1342
9T6M|1|a|G|1343
*
9T6M|1|a|C|1404
9T6M|1|a|U|1405
*
9T6M|1|a|A|1597
9T6M|1|a|A|1598
9T6M|1|a|U|1599
9T6M|1|a|C|1600
9T6M|1|a|G|1601
9T6M|1|a|U|1602
9T6M|1|a|A|1603

Current chains

Chain a

23S rRNA

Nearby chains

Chain s

Large ribosomal subunit protein uL23