J4_9TEX_007

3D structure

PDB id

9TEX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dal2 bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEX|1|a|C|601
9TEX|1|a|A|602
9TEX|1|a|A|603
9TEX|1|a|G|604
*
9TEX|1|a|C|624
9TEX|1|a|G|625
9TEX|1|a|A|626
9TEX|1|a|A|627
9TEX|1|a|G|628
*
9TEX|1|a|C|635
9TEX|1|a|G|636
9TEX|1|a|A|637
9TEX|1|a|G|638
*
9TEX|1|a|C|650
9TEX|1|a|G|651
9TEX|1|a|U|652
9TEX|1|a|U|653
9TEX|1|a|A|654
9TEX|1|a|A|655
9TEX|1|a|G|656

Current chains

Chain a

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL35

Chain e

Large ribosomal subunit protein uL4

Chain k

50S ribosomal protein L15