J4_9TEZ_003

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9TEZ|1|V|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TEZ|1|V|C|601
9TEZ|1|V|A|602
9TEZ|1|V|A|603
9TEZ|1|V|G|604
*
9TEZ|1|V|C|624
9TEZ|1|V|G|625
9TEZ|1|V|A|626
9TEZ|1|V|A|627
9TEZ|1|V|G|628
*
9TEZ|1|V|C|635
9TEZ|1|V|G|636
9TEZ|1|V|A|637
9TEZ|1|V|G|638
*
9TEZ|1|V|C|650
9TEZ|1|V|G|651
9TEZ|1|V|U|652
9TEZ|1|V|U|653
9TEZ|1|V|A|654
9TEZ|1|V|A|655
9TEZ|1|V|G|656

Current chains

Chain V

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL35

Chain e

Large ribosomal subunit protein uL4

Chain k

50S ribosomal protein L15