J4_9TKO_001
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAGUAAUG*UG*CUAG*CC
- Length
- 16 nucleotides
- Bulged bases
- 9TKO|1|D1|U|121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|G|115
9TKO|1|D1|A|116
9TKO|1|D1|G|117
9TKO|1|D1|U|118
9TKO|1|D1|A|119
9TKO|1|D1|A|120
9TKO|1|D1|U|121
9TKO|1|D1|G|122
*
9TKO|1|D1|U|239
9TKO|1|D1|G|240
*
9TKO|1|D1|C|286
9TKO|1|D1|U|287
9TKO|1|D1|A|288
9TKO|1|D1|G|289
*
9TKO|1|D1|C|311
9TKO|1|D1|C|312
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AO
- Small ribosomal subunit protein bS16
- Chain AP
- Small ribosomal subunit protein uS17
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