J4_9TQA_002

3D structure

PDB id

9TQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, trapped conformational ground state of SSU-h44 apical loop, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.06 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9TQA|1|A|C|183, 9TQA|1|A|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TQA|1|A|G|142
9TQA|1|A|A|143
9TQA|1|A|G|144
*
9TQA|1|A|C|178
9TQA|1|A|A|179
9TQA|1|A|U|180
9TQA|1|A|A|181
9TQA|1|A|A|182
9TQA|1|A|C|183
9TQA|1|A|G|184
*
9TQA|1|A|C|193
9TQA|1|A|C|194
9TQA|1|A|A|195
9TQA|1|A|A|196
9TQA|1|A|A|197
9TQA|1|A|G|198
*
9TQA|1|A|U|219
9TQA|1|A|G|220
9TQA|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

Small ribosomal subunit protein bS20