J4_9TZ5_002

3D structure

PDB id

9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

CAGAAU*AGCC*GCG*CGUACG

Length

19 nucleotides

Bulged bases

9TZ5|1|a|C|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ5|1|a|C|300
9TZ5|1|a|A|301
9TZ5|1|a|G|302
9TZ5|1|a|A|303
9TZ5|1|a|A|304
9TZ5|1|a|U|305
*
9TZ5|1|a|A|320
9TZ5|1|a|G|321
9TZ5|1|a|C|322
9TZ5|1|a|C|323
*
9TZ5|1|a|G|327
9TZ5|1|a|C|328
9TZ5|1|a|G|329
*
9TZ5|1|a|C|341
9TZ5|1|a|G|342
9TZ5|1|a|U|343
9TZ5|1|a|A|344
9TZ5|1|a|C|345
9TZ5|1|a|G|346

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein uL24

Chain w

Large ribosomal subunit protein uL4