J4_9TZ5_011

3D structure

PDB id

9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.22 Å

Loop

Sequence

GAGC*GAC*GGACG*CCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TZ5|1|a|G|2659
9TZ5|1|a|A|2660
9TZ5|1|a|G|2661
9TZ5|1|a|C|2662
*
9TZ5|1|a|G|2690
9TZ5|1|a|A|2691
9TZ5|1|a|C|2692
*
9TZ5|1|a|G|2747
9TZ5|1|a|G|2748
9TZ5|1|a|A|2749
9TZ5|1|a|C|2750
9TZ5|1|a|G|2751
*
9TZ5|1|a|C|2785
9TZ5|1|a|C|2786
9TZ5|1|a|C|2787

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain i

Large ribosomal subunit protein uL13

Chain x

Large ribosomal subunit protein uL14