J4_9W0N_014
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGG*CGUC*GAAGGUCGUCGG*CCGGCC
- Length
- 26 nucleotides
- Bulged bases
- 9W0N|1|6|U|8, 9W0N|1|6|U|47, 9W0N|1|6|C|48
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9W0N|1|6|G|7
9W0N|1|6|U|8
9W0N|1|6|G|9
9W0N|1|6|G|10
*
9W0N|1|6|C|25
9W0N|1|6|G|26
9W0N|1|6|U|27
9W0N|1|6|C|28
*
9W0N|1|6|G|42
9W0N|1|6|A|43
9W0N|1|6|A|44
9W0N|1|6|G|45
9W0N|1|6|G|46
9W0N|1|6|U|47
9W0N|1|6|C|48
9W0N|1|6|G|49
9W0N|1|6|U|50
9W0N|1|6|C|51
9W0N|1|6|G|52
9W0N|1|6|G|53
*
9W0N|1|6|C|61
9W0N|1|6|C|62
9W0N|1|6|G|63
9W0N|1|6|G|64
9W0N|1|6|C|65
9W0N|1|6|C|66
Current chains
- Chain 6
- tRNA(fMet)
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain C
- Large ribosomal subunit protein bL33
- Chain L
- Small ribosomal subunit protein uS7
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