J4_9WW5_003
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CUCC*GCC*GCGCG*CGGAGCG
- Length
- 19 nucleotides
- Bulged bases
- 9WW5|1|AA|G|1269, 9WW5|1|AA|A|1270, 9WW5|1|AA|G|1271, 9WW5|1|AA|C|1272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW5|1|AA|C|981
9WW5|1|AA|U|982
9WW5|1|AA|C|983
9WW5|1|AA|C|984
*
9WW5|1|AA|G|1070
9WW5|1|AA|C|1071
9WW5|1|AA|C|1072
*
9WW5|1|AA|G|1240
9WW5|1|AA|C|1241
9WW5|1|AA|G|1242
9WW5|1|AA|C|1243
9WW5|1|AA|G|1244
*
9WW5|1|AA|C|1267
9WW5|1|AA|G|1268
9WW5|1|AA|G|1269
9WW5|1|AA|A|1270
9WW5|1|AA|G|1271
9WW5|1|AA|C|1272
9WW5|1|AA|G|1273
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AH
- Large ribosomal subunit protein eL6
- Chain AI
- 60S ribosomal protein L7
- Chain Ad
- 60S ribosomal protein L29
Coloring options: