J4_9WW5_007
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GG*UGUGAA*UGGAAAG*UC
- Length
- 17 nucleotides
- Bulged bases
- 9WW5|1|AA|A|2696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9WW5_007 not in the Motif Atlas
- Homologous match to J4_8GLP_008
- Geometric discrepancy: 0.0601
- The information below is about J4_8GLP_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW5|1|AA|G|2618
9WW5|1|AA|G|2619
*
9WW5|1|AA|U|2637
9WW5|1|AA|G|2638
9WW5|1|AA|U|2639
9WW5|1|AA|G|2640
9WW5|1|AA|A|2641
9WW5|1|AA|A|2642
*
9WW5|1|AA|U|2692
9WW5|1|AA|G|2693
9WW5|1|AA|G|2694
9WW5|1|AA|A|2695
9WW5|1|AA|A|2696
9WW5|1|AA|A|2697
9WW5|1|AA|G|2698
*
9WW5|1|AA|U|2718
9WW5|1|AA|C|2719
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AT
- 60S ribosomal protein L19
- Chain AW
- 60S ribosomal protein L22
- Chain Ai
- 60S ribosomal protein L34
- Chain Am
- 60S ribosomal protein L38
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