J4_9Y49_009

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

9Y49|1|A6|U|4677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|A6|G|4587
9Y49|1|A6|U|4588
9Y49|1|A6|A|4589
9Y49|1|A6|A|4590
*
9Y49|1|A6|U|4620
9Y49|1|A6|C|4621
*
9Y49|1|A6|G|4676
9Y49|1|A6|U|4677
9Y49|1|A6|G|4678
*
9Y49|1|A6|C|4712
9Y49|1|A6|G|4713
9Y49|1|A6|C|4714
9Y49|1|A6|C|4715

Current chains

Chain A6

LSU-beta rRNA (2069-MER)

Nearby chains

Chain CB

60S ribosomal protein L3

Chain CO

60S ribosomal protein L13a

Chain CV

60S ribosomal protein L23