J4_9ZN2_001

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CC*GAGUAG*UGAAUAUG*CAAG

Length

20 nucleotides

Bulged bases

9ZN2|1|A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZN2|1|A|C|268
9ZN2|1|A|C|269
*
9ZN2|1|A|G|370
9ZN2|1|A|A|371
9ZN2|1|A|G|372
9ZN2|1|A|U|373
9ZN2|1|A|A|374
9ZN2|1|A|G|375
*
9ZN2|1|A|U|399
9ZN2|1|A|G|400
9ZN2|1|A|A|401
9ZN2|1|A|A|402
9ZN2|1|A|U|403
9ZN2|1|A|A|404
9ZN2|1|A|U|405
9ZN2|1|A|G|406
*
9ZN2|1|A|C|421
9ZN2|1|A|A|422
9ZN2|1|A|A|423
9ZN2|1|A|G|424

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain H

Large ribosomal subunit protein bL9

Chain Z

50S ribosomal protein L28