J4_9ZN2_003

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9ZN2|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZN2|1|A|C|601
9ZN2|1|A|A|602
9ZN2|1|A|A|603
9ZN2|1|A|G|604
*
9ZN2|1|A|C|624
9ZN2|1|A|G|625
9ZN2|1|A|A|626
9ZN2|1|A|A|627
9ZN2|1|A|G|628
*
9ZN2|1|A|C|635
9ZN2|1|A|G|636
9ZN2|1|A|A|637
9ZN2|1|A|G|638
*
9ZN2|1|A|C|650
9ZN2|1|A|G|651
9ZN2|1|A|U|652
9ZN2|1|A|U|653
9ZN2|1|A|A|654
9ZN2|1|A|A|655
9ZN2|1|A|G|656

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 7

50S ribosomal protein L35

Chain E

Large ribosomal subunit protein uL4

Chain N

50S ribosomal protein L15