J4_9ZN2_013

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9ZN2|1|a|C|183, 9ZN2|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZN2|1|a|G|142
9ZN2|1|a|A|143
9ZN2|1|a|G|144
*
9ZN2|1|a|C|178
9ZN2|1|a|A|179
9ZN2|1|a|U|180
9ZN2|1|a|A|181
9ZN2|1|a|A|182
9ZN2|1|a|C|183
9ZN2|1|a|G|184
*
9ZN2|1|a|C|193
9ZN2|1|a|C|194
9ZN2|1|a|A|195
9ZN2|1|a|A|196
9ZN2|1|a|A|197
9ZN2|1|a|G|198
*
9ZN2|1|a|U|219
9ZN2|1|a|G|220
9ZN2|1|a|C|221

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain t

Small ribosomal subunit protein bS20