J4_9ZN2_015
3D structure
- PDB id
- 9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- G(4SU)GG*CGU*AAGGUCG*CC
- Length
- 16 nucleotides
- Bulged bases
- 9ZN2|1|v|U|48, 9ZN2|1|v|C|49
- QA status
- Modified nucleotides: 4SU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9ZN2|1|v|G|7
9ZN2|1|v|4SU|8
9ZN2|1|v|G|9
9ZN2|1|v|G|10
*
9ZN2|1|v|C|26
9ZN2|1|v|G|27
9ZN2|1|v|U|28
*
9ZN2|1|v|A|44
9ZN2|1|v|A|45
9ZN2|1|v|G|46
9ZN2|1|v|G|47
9ZN2|1|v|U|48
9ZN2|1|v|C|49
9ZN2|1|v|G|50
*
9ZN2|1|v|C|66
9ZN2|1|v|C|67
Current chains
- Chain v
- initiator tRNA fMet, DNA (5'-R(P*A)-3')
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain m
- Small ribosomal subunit protein uS13
Coloring options: