J4_9ZTL_001
3D structure
- PDB id
- 9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- AUCG*CCU*AUGAUG*CU
- Length
- 15 nucleotides
- Bulged bases
- 9ZTL|1|5|U|8, 9ZTL|1|5|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9ZTL_001 not in the Motif Atlas
- Homologous match to J4_4WT8_034
- Geometric discrepancy: 0.1893
- The information below is about J4_4WT8_034
- Detailed Annotation
- tRNA junction
- Broad Annotation
- No text annotation
- Motif group
- J4_95067.2
- Basepair signature
- cWW-F-cWW-cWW-cHS-F-cWW-cWW
- Number of instances in this motif group
- 49
Unit IDs
9ZTL|1|5|A|7
9ZTL|1|5|U|8
9ZTL|1|5|C|9
9ZTL|1|5|G|10
*
9ZTL|1|5|C|25
9ZTL|1|5|C|26
9ZTL|1|5|U|27
*
9ZTL|1|5|A|43
9ZTL|1|5|U|44
9ZTL|1|5|G|45
9ZTL|1|5|A|46
9ZTL|1|5|U|47
9ZTL|1|5|G|48
*
9ZTL|1|5|C|64
9ZTL|1|5|U|65
Current chains
- Chain 5
- P-site tRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain M
- 30S ribosomal protein S13
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 50S ribosomal protein L16
Coloring options: