J4_9ZTL_007

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9ZTL|1|a|U|653, 9ZTL|1|a|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZTL|1|a|C|601
9ZTL|1|a|A|602
9ZTL|1|a|A|603
9ZTL|1|a|G|604
*
9ZTL|1|a|C|624
9ZTL|1|a|G|625
9ZTL|1|a|A|626
9ZTL|1|a|A|627
9ZTL|1|a|G|628
*
9ZTL|1|a|C|635
9ZTL|1|a|G|636
9ZTL|1|a|A|637
9ZTL|1|a|G|638
*
9ZTL|1|a|C|650
9ZTL|1|a|G|651
9ZTL|1|a|U|652
9ZTL|1|a|U|653
9ZTL|1|a|A|654
9ZTL|1|a|A|655
9ZTL|1|a|G|656

Current chains

Chain a

23s rRNA

Nearby chains

Chain 2

50S ribosomal protein L35

Chain e

Large ribosomal subunit protein uL4

Chain k

50S ribosomal protein L15