J5_10QM_001

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

10QM|1|I|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|C|47
10QM|1|I|G|48
10QM|1|I|A|49
10QM|1|I|U|50
10QM|1|I|G|51
10QM|1|I|A|52
10QM|1|I|A|53
10QM|1|I|G|54
*
10QM|1|I|C|116
10QM|1|I|G|117
10QM|1|I|A|118
10QM|1|I|A|119
10QM|1|I|U|120
10QM|1|I|G|121
*
10QM|1|I|C|130
10QM|1|I|A|131
*
10QM|1|I|U|148
10QM|1|I|A|149
10QM|1|I|U|150
*
10QM|1|I|A|176
10QM|1|I|G|177
10QM|1|I|G|178

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain g

Large ribosomal subunit protein uL29

Chain k

50S ribosomal protein L34