J5_11GG_003

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CGAUGAAG*CGAAUGG*CCA*UAU*AGG

Length

24 nucleotides

Bulged bases

11GG|1|I|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|C|47
11GG|1|I|G|48
11GG|1|I|A|49
11GG|1|I|U|50
11GG|1|I|G|51
11GG|1|I|A|52
11GG|1|I|A|53
11GG|1|I|G|54
*
11GG|1|I|C|116
11GG|1|I|G|117
11GG|1|I|A|118
11GG|1|I|A|119
11GG|1|I|U|120
11GG|1|I|G|121
11GG|1|I|G|122
*
11GG|1|I|C|129
11GG|1|I|C|130
11GG|1|I|A|131
*
11GG|1|I|U|148
11GG|1|I|A|149
11GG|1|I|U|150
*
11GG|1|I|A|176
11GG|1|I|G|177
11GG|1|I|G|178

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L34