J5_1Z58_006

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAACUUUGCAAUCUCA*UC*GC*GUGAAUAGG*CGCUGUC

Length

37 nucleotides

Bulged bases

1Z58|1|2|G|1754, 1Z58|1|2|G|1975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Z58|1|2|G|1683
1Z58|1|2|G|1684
1Z58|1|2|A|1685
1Z58|1|2|A|1686
1Z58|1|2|C|1687
1Z58|1|2|U|1688
1Z58|1|2|U|1689
1Z58|1|2|U|1690
1Z58|1|2|G|1691
1Z58|1|2|C|1692
1Z58|1|2|A|1693
1Z58|1|2|A|1694
1Z58|1|2|U|1695
1Z58|1|2|C|1696
1Z58|1|2|U|1697
1Z58|1|2|C|1698
1Z58|1|2|A|1699
*
1Z58|1|2|U|1723
1Z58|1|2|C|1724
*
1Z58|1|2|G|1742
1Z58|1|2|C|1743
*
1Z58|1|2|G|1747
1Z58|1|2|U|1748
1Z58|1|2|G|1749
1Z58|1|2|A|1750
1Z58|1|2|A|1751
1Z58|1|2|U|1752
1Z58|1|2|A|1753
1Z58|1|2|G|1754
1Z58|1|2|G|1755
*
1Z58|1|2|C|1971
1Z58|1|2|G|1972
1Z58|1|2|C|1973
1Z58|1|2|U|1974
1Z58|1|2|G|1975
1Z58|1|2|U|1976
1Z58|1|2|C|1977

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains