J5_23WI_008
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
23WI|1|a|C|36
23WI|1|a|U|37
23WI|1|a|G|38
23WI|1|a|G|39
*
23WI|1|a|C|403
23WI|1|a|G|404
23WI|1|a|U|405
23WI|1|a|G|406
*
23WI|1|a|C|436
23WI|1|a|U|437
23WI|1|a|U|438
23WI|1|a|U|439
23WI|1|a|C|440
23WI|1|a|A|441
23WI|1|a|G|442
*
23WI|1|a|C|492
23WI|1|a|A|493
23WI|1|a|G|494
23WI|1|a|A|495
23WI|1|a|A|496
23WI|1|a|G|497
23WI|1|a|A|498
23WI|1|a|A|499
23WI|1|a|G|500
*
23WI|1|a|C|545
23WI|1|a|A|546
23WI|1|a|A|547
23WI|1|a|G|548
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
- Chain l
- Small ribosomal subunit protein uS12
Coloring options: