J5_28UH_004
3D structure
- PDB id
- 28UH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome, trapped conformational ground state of SSU-h44 apical loop, with A/P- and P/E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.06 Å
Loop
- Sequence
- CGAUGAAG*CGAAUG*CA*UAU*AGG
- Length
- 22 nucleotides
- Bulged bases
- 28UH|1|a|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28UH|1|a|C|47
28UH|1|a|G|48
28UH|1|a|A|49
28UH|1|a|U|50
28UH|1|a|G|51
28UH|1|a|A|52
28UH|1|a|A|53
28UH|1|a|G|54
*
28UH|1|a|C|116
28UH|1|a|G|117
28UH|1|a|A|118
28UH|1|a|A|119
28UH|1|a|U|120
28UH|1|a|G|121
*
28UH|1|a|C|130
28UH|1|a|A|131
*
28UH|1|a|U|148
28UH|1|a|A|149
28UH|1|a|U|150
*
28UH|1|a|A|176
28UH|1|a|G|177
28UH|1|a|G|178
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
Coloring options: