J5_2J28_005
3D structure
- PDB id
- 2J28 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MODEL OF E. COLI SRP BOUND TO 70S RNCS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 2J28|1|B|A|2448, 2J28|1|B|U|2449, 2J28|1|B|U|2585, 2J28|1|B|U|2609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2J28|1|B|G|2057
2J28|1|B|A|2058
2J28|1|B|A|2059
2J28|1|B|A|2060
2J28|1|B|G|2061
2J28|1|B|A|2062
2J28|1|B|C|2063
2J28|1|B|C|2064
*
2J28|1|B|G|2446
2J28|1|B|G|2447
2J28|1|B|A|2448
2J28|1|B|U|2449
2J28|1|B|A|2450
2J28|1|B|A|2451
2J28|1|B|C|2452
2J28|1|B|A|2453
*
2J28|1|B|U|2500
2J28|1|B|C|2501
2J28|1|B|G|2502
2J28|1|B|A|2503
2J28|1|B|U|2504
2J28|1|B|G|2505
2J28|1|B|U|2506
*
2J28|1|B|G|2583
2J28|1|B|U|2584
2J28|1|B|U|2585
2J28|1|B|U|2586
2J28|1|B|A|2587
2J28|1|B|G|2588
*
2J28|1|B|C|2606
2J28|1|B|G|2607
2J28|1|B|G|2608
2J28|1|B|U|2609
2J28|1|B|C|2610
2J28|1|B|C|2611
Current chains
- Chain B
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: