J5_3BBX_003

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

GCAAAAUGG*CG*UC*GAUACCAGC*GGC

Length

25 nucleotides

Bulged bases

3BBX|1|B|U|1758, 3BBX|1|B|G|1763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3BBX|1|B|G|1674
3BBX|1|B|C|1675
3BBX|1|B|A|1676
3BBX|1|B|A|1677
3BBX|1|B|A|1678
3BBX|1|B|A|1679
3BBX|1|B|U|1680
3BBX|1|B|G|1681
3BBX|1|B|G|1682
*
3BBX|1|B|C|1706
3BBX|1|B|G|1707
*
3BBX|1|B|U|1751
3BBX|1|B|C|1752
*
3BBX|1|B|G|1756
3BBX|1|B|A|1757
3BBX|1|B|U|1758
3BBX|1|B|A|1759
3BBX|1|B|C|1760
3BBX|1|B|C|1761
3BBX|1|B|A|1762
3BBX|1|B|G|1763
3BBX|1|B|C|1764
*
3BBX|1|B|G|1988
3BBX|1|B|G|1989
3BBX|1|B|C|1990

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14