J5_3BBX_004
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 3BBX|1|B|A|2060, 3BBX|1|B|A|2062, 3BBX|1|B|A|2448, 3BBX|1|B|U|2449, 3BBX|1|B|C|2501, 3BBX|1|B|G|2502, 3BBX|1|B|A|2503, 3BBX|1|B|U|2585, 3BBX|1|B|U|2609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3BBX|1|B|G|2057
3BBX|1|B|A|2058
3BBX|1|B|A|2059
3BBX|1|B|A|2060
3BBX|1|B|G|2061
3BBX|1|B|A|2062
3BBX|1|B|C|2063
3BBX|1|B|C|2064
*
3BBX|1|B|G|2446
3BBX|1|B|G|2447
3BBX|1|B|A|2448
3BBX|1|B|U|2449
3BBX|1|B|A|2450
3BBX|1|B|A|2451
3BBX|1|B|C|2452
3BBX|1|B|A|2453
*
3BBX|1|B|U|2500
3BBX|1|B|C|2501
3BBX|1|B|G|2502
3BBX|1|B|A|2503
3BBX|1|B|U|2504
3BBX|1|B|G|2505
3BBX|1|B|U|2506
3BBX|1|B|C|2507
*
3BBX|1|B|G|2582
3BBX|1|B|G|2583
3BBX|1|B|U|2584
3BBX|1|B|U|2585
3BBX|1|B|U|2586
3BBX|1|B|A|2587
3BBX|1|B|G|2588
*
3BBX|1|B|C|2606
3BBX|1|B|G|2607
3BBX|1|B|G|2608
3BBX|1|B|U|2609
3BBX|1|B|C|2610
3BBX|1|B|C|2611
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
- Chain W
- 50S ribosomal protein L27
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