J5_3BWP_001

3D structure

PDB id

3BWP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a self-spliced group II intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAUAG*CGAA*UUAG*CAAAC*GGAAA

Length

23 nucleotides

Bulged bases

3BWP|1|A|A|245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3BWP|1|A|U|24
3BWP|1|A|A|25
3BWP|1|A|U|26
3BWP|1|A|A|27
3BWP|1|A|G|28
*
3BWP|1|A|C|40
3BWP|1|A|G|41
3BWP|1|A|A|42
3BWP|1|A|A|43
*
3BWP|1|A|U|65
3BWP|1|A|U|66
3BWP|1|A|A|67
3BWP|1|A|G|68
*
3BWP|1|A|C|119
3BWP|1|A|A|120
3BWP|1|A|A|121
3BWP|1|A|A|122
3BWP|1|A|C|123
*
3BWP|1|A|G|243
3BWP|1|A|G|244
3BWP|1|A|A|245
3BWP|1|A|A|246
3BWP|1|A|A|247

Current chains

Chain A

Group IIC intron

Nearby chains