J5_3EOG_001

3D structure

PDB id

3EOG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystallization showing exon recognition by a group II intron

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

UAUAG*CGAA*UUAG*CAAAC*GGAAA

Length

23 nucleotides

Bulged bases

3EOG|1|A|A|245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3EOG|1|A|U|24
3EOG|1|A|A|25
3EOG|1|A|U|26
3EOG|1|A|A|27
3EOG|1|A|G|28
*
3EOG|1|A|C|40
3EOG|1|A|G|41
3EOG|1|A|A|42
3EOG|1|A|A|43
*
3EOG|1|A|U|65
3EOG|1|A|U|66
3EOG|1|A|A|67
3EOG|1|A|G|68
*
3EOG|1|A|C|119
3EOG|1|A|A|120
3EOG|1|A|A|121
3EOG|1|A|A|122
3EOG|1|A|C|123
*
3EOG|1|A|G|243
3EOG|1|A|G|244
3EOG|1|A|A|245
3EOG|1|A|A|246
3EOG|1|A|A|247

Current chains

Chain A

Group IIC intron

Nearby chains