J5_3J74_001

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCAGCG*CGUACG*CGGAGUCG*CAAAGCG*UAAG

Length

31 nucleotides

Bulged bases

3J74|1|5|G|156, 3J74|1|5|C|159, 3J74|1|5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J74|1|5|C|111
3J74|1|5|C|112
3J74|1|5|A|113
3J74|1|5|G|114
3J74|1|5|C|115
3J74|1|5|G|116
*
3J74|1|5|C|155
3J74|1|5|G|156
3J74|1|5|U|157
3J74|1|5|A|158
3J74|1|5|C|159
3J74|1|5|G|160
*
3J74|1|5|C|276
3J74|1|5|G|277
3J74|1|5|G|278
3J74|1|5|A|279
3J74|1|5|G|280
3J74|1|5|U|281
3J74|1|5|C|282
3J74|1|5|G|283
*
3J74|1|5|C|304
3J74|1|5|A|305
3J74|1|5|A|306
3J74|1|5|A|307
3J74|1|5|G|308
3J74|1|5|C|309
3J74|1|5|G|310
*
3J74|1|5|U|327
3J74|1|5|A|328
3J74|1|5|A|329
3J74|1|5|G|330

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

Ribosomal protein eL8

Chain L

Ribosomal protein eL13

Chain N

Ribosomal protein eL15

Chain h

Ribosomal protein uL29

Chain i

Ribosomal protein eL36