J5_3J74_006

3D structure

PDB id

3J74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAUU*AAUAG

Length

37 nucleotides

Bulged bases

3J74|1|S2|A|590, 3J74|1|S2|C|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J74|1|S2|C|30
3J74|1|S2|U|31
3J74|1|S2|U|32
3J74|1|S2|G|33
3J74|1|S2|U|34
*
3J74|1|S2|A|521
3J74|1|S2|A|522
3J74|1|S2|A|523
3J74|1|S2|U|524
3J74|1|S2|A|525
3J74|1|S2|A|526
3J74|1|S2|C|527
*
3J74|1|S2|G|558
3J74|1|S2|G|559
3J74|1|S2|A|560
3J74|1|S2|A|561
3J74|1|S2|U|562
3J74|1|S2|G|563
3J74|1|S2|A|564
3J74|1|S2|G|565
*
3J74|1|S2|C|585
3J74|1|S2|G|586
3J74|1|S2|A|587
3J74|1|S2|G|588
3J74|1|S2|G|589
3J74|1|S2|A|590
3J74|1|S2|U|591
3J74|1|S2|C|592
3J74|1|S2|C|593
3J74|1|S2|A|594
3J74|1|S2|U|595
3J74|1|S2|U|596
*
3J74|1|S2|A|640
3J74|1|S2|A|641
3J74|1|S2|U|642
3J74|1|S2|A|643
3J74|1|S2|G|644

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

Ribosomal protein uS4

Chain SX

Ribosomal protein uS12

Chain Se

Ribosomal protein eS30