J5_3J7P_004
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUAGUAGCAAAUAU*AGGCCGAAGUGGA*UCCAA*UCUGGCAUGUUG*CAGCGAAACC
- Length
- 55 nucleotides
- Bulged bases
- 3J7P|1|5|A|2366, 3J7P|1|5|U|2369, 3J7P|1|5|A|2396, 3J7P|1|5|U|2826, 3J7P|1|5|U|2828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J7P|1|5|G|2357
3J7P|1|5|G|2358
3J7P|1|5|U|2359
3J7P|1|5|A|2360
3J7P|1|5|G|2361
3J7P|1|5|U|2362
3J7P|1|5|A|2363
3J7P|1|5|G|2364
3J7P|1|5|C|2365
3J7P|1|5|A|2366
3J7P|1|5|A|2367
3J7P|1|5|A|2368
3J7P|1|5|U|2369
3J7P|1|5|A|2370
3J7P|1|5|U|2371
*
3J7P|1|5|A|2389
3J7P|1|5|G|2390
3J7P|1|5|G|2391
3J7P|1|5|C|2392
3J7P|1|5|C|2393
3J7P|1|5|G|2394
3J7P|1|5|A|2395
3J7P|1|5|A|2396
3J7P|1|5|G|2397
3J7P|1|5|U|2398
3J7P|1|5|G|2399
3J7P|1|5|G|2400
3J7P|1|5|A|2401
*
3J7P|1|5|U|2803
3J7P|1|5|C|2804
3J7P|1|5|C|2805
3J7P|1|5|A|2806
3J7P|1|5|A|2807
*
3J7P|1|5|U|2819
3J7P|1|5|C|2820
3J7P|1|5|U|2821
3J7P|1|5|G|2822
3J7P|1|5|G|2823
3J7P|1|5|C|2824
3J7P|1|5|A|2825
3J7P|1|5|U|2826
3J7P|1|5|G|2827
3J7P|1|5|U|2828
3J7P|1|5|U|2829
3J7P|1|5|G|2830
*
3J7P|1|5|C|3855
3J7P|1|5|A|3856
3J7P|1|5|G|3857
3J7P|1|5|C|3858
3J7P|1|5|G|3859
3J7P|1|5|A|3860
3J7P|1|5|A|3861
3J7P|1|5|A|3862
3J7P|1|5|C|3863
3J7P|1|5|C|3864
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- Ribosomal protein uL4
- Chain P
- Ribosomal protein uL22
- Chain R
- Ribosomal protein eL19
- Chain d
- Ribosomal protein eL31
- Chain g
- Ribosomal protein eL34
- Chain j
- Ribosomal protein eL37
Coloring options: