Loop J5_3J7P

3D structure

PDB id: 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the 80S mammalian ribosome bound to eEF2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

Loop

Sequence: GUCCUAAGGC*GCUUG*CC*GGGGCCUCACGAUCCUUC*GGAGGUGUC
Length: 44 nucleotides
Bulged bases: 3J7P|1|5|C|4332, 3J7P|1|5|U|4374
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

3J7P|1|5|G|4228
3J7P|1|5|U|4229
3J7P|1|5|C|4230
3J7P|1|5|C|4231
3J7P|1|5|U|4232
3J7P|1|5|A|4233
3J7P|1|5|A|4234
3J7P|1|5|G|4235
3J7P|1|5|G|4236
3J7P|1|5|C|4237
*
3J7P|1|5|G|4287
3J7P|1|5|C|4288
3J7P|1|5|U|4289
3J7P|1|5|U|4290
3J7P|1|5|G|4291
*
3J7P|1|5|C|4318
3J7P|1|5|C|4319
*
3J7P|1|5|G|4328
3J7P|1|5|G|4329
3J7P|1|5|G|4330
3J7P|1|5|G|4331
3J7P|1|5|C|4332
3J7P|1|5|C|4333
3J7P|1|5|U|4334
3J7P|1|5|C|4335
3J7P|1|5|A|4336
3J7P|1|5|C|4337
3J7P|1|5|G|4338
3J7P|1|5|A|4339
3J7P|1|5|U|4340
3J7P|1|5|C|4341
3J7P|1|5|C|4342
3J7P|1|5|U|4343
3J7P|1|5|U|4344
3J7P|1|5|C|4345
*
3J7P|1|5|G|4367
3J7P|1|5|G|4368
3J7P|1|5|A|4369
3J7P|1|5|G|4370
3J7P|1|5|G|4371
3J7P|1|5|U|4372
3J7P|1|5|G|4373
3J7P|1|5|U|4374
3J7P|1|5|C|4375

Current chains

Chain 5: 28S ribosomal RNA

Nearby chains

Chain D: Ribosomal protein uL18
Chain Q: Ribosomal protein eL18
Chain T: Ribosomal protein eL21
Chain a: Ribosomal protein uL15
Chain o: Ribosomal protein eL42

J5_3J7P_009