J5_3J9M_003
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 3J9M|1|A|A|2725, 3J9M|1|A|A|2935, 3J9M|1|A|U|2936, 3J9M|1|A|G|2992, 3J9M|1|A|U|3096, 3J9M|1|A|U|3097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9M|1|A|A|2720
3J9M|1|A|G|2721
3J9M|1|A|A|2722
3J9M|1|A|A|2723
3J9M|1|A|G|2724
3J9M|1|A|A|2725
3J9M|1|A|C|2726
3J9M|1|A|C|2727
*
3J9M|1|A|G|2933
3J9M|1|A|G|2934
3J9M|1|A|A|2935
3J9M|1|A|U|2936
3J9M|1|A|A|2937
3J9M|1|A|A|2938
3J9M|1|A|C|2939
3J9M|1|A|A|2940
*
3J9M|1|A|U|2987
3J9M|1|A|C|2988
3J9M|1|A|G|2989
3J9M|1|A|A|2990
3J9M|1|A|U|2991
3J9M|1|A|G|2992
3J9M|1|A|U|2993
3J9M|1|A|U|2994
*
3J9M|1|A|A|3069
3J9M|1|A|G|3070
3J9M|1|A|U|3071
3J9M|1|A|U|3072
3J9M|1|A|C|3073
3J9M|1|A|A|3074
3J9M|1|A|G|3075
*
3J9M|1|A|C|3093
3J9M|1|A|G|3094
3J9M|1|A|G|3095
3J9M|1|A|U|3096
3J9M|1|A|U|3097
3J9M|1|A|U|3098
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- bL32m
- Chain E
- uL3m
- Chain F
- uL4m
- Chain M
- uL15m
- Chain N
- uL16m
- Chain T
- uL22m
Coloring options: