J5_3J9M_004
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUAA*UUUCG*CU*AG*CGGAACAA
- Length
- 22 nucleotides
- Bulged bases
- 3J9M|1|A|U|2739, 3J9M|1|A|G|2916, 3J9M|1|A|G|2917, 3J9M|1|A|A|2918, 3J9M|1|A|A|2921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9M|1|A|U|2737
3J9M|1|A|U|2738
3J9M|1|A|U|2739
3J9M|1|A|A|2740
3J9M|1|A|A|2741
*
3J9M|1|A|U|2806
3J9M|1|A|U|2807
3J9M|1|A|U|2808
3J9M|1|A|C|2809
3J9M|1|A|G|2810
*
3J9M|1|A|C|2822
3J9M|1|A|U|2823
*
3J9M|1|A|A|2845
3J9M|1|A|G|2846
*
3J9M|1|A|C|2915
3J9M|1|A|G|2916
3J9M|1|A|G|2917
3J9M|1|A|A|2918
3J9M|1|A|A|2919
3J9M|1|A|C|2920
3J9M|1|A|A|2921
3J9M|1|A|A|2922
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- bL35m
- Chain D
- uL2m
- Chain M
- uL15m
- Chain W
- bL27m
- Chain X
- bL28m
- Chain u
- E-site tRNA
Coloring options: