J5_3J9Z_011
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 3J9Z|1|LA|A|2059, 3J9Z|1|LA|A|2062, 3J9Z|1|LA|A|2448, 3J9Z|1|LA|U|2449, 3J9Z|1|LA|G|2505, 3J9Z|1|LA|U|2609, 3J9Z|1|LA|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9Z|1|LA|G|2057
3J9Z|1|LA|A|2058
3J9Z|1|LA|A|2059
3J9Z|1|LA|A|2060
3J9Z|1|LA|G|2061
3J9Z|1|LA|A|2062
3J9Z|1|LA|C|2063
3J9Z|1|LA|C|2064
*
3J9Z|1|LA|G|2446
3J9Z|1|LA|G|2447
3J9Z|1|LA|A|2448
3J9Z|1|LA|U|2449
3J9Z|1|LA|A|2450
3J9Z|1|LA|A|2451
3J9Z|1|LA|C|2452
3J9Z|1|LA|A|2453
*
3J9Z|1|LA|U|2500
3J9Z|1|LA|C|2501
3J9Z|1|LA|G|2502
3J9Z|1|LA|A|2503
3J9Z|1|LA|U|2504
3J9Z|1|LA|G|2505
3J9Z|1|LA|U|2506
*
3J9Z|1|LA|G|2583
3J9Z|1|LA|U|2584
3J9Z|1|LA|U|2585
3J9Z|1|LA|U|2586
3J9Z|1|LA|A|2587
3J9Z|1|LA|G|2588
*
3J9Z|1|LA|C|2606
3J9Z|1|LA|G|2607
3J9Z|1|LA|G|2608
3J9Z|1|LA|U|2609
3J9Z|1|LA|C|2610
3J9Z|1|LA|C|2611
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
- Chain L1
- 50S ribosomal protein L32
- Chain L6
- 50S ribosomal protein L4
- Chain LH
- 50S ribosomal protein L15
- Chain LI
- 50S ribosomal protein L16
- Chain LN
- 50S ribosomal protein L2
- Chain LQ
- 50S ribosomal protein L22
- Chain LU
- 50S ribosomal protein L27
- Chain LX
- 50S ribosomal protein L3
- Chain S6
- Transfer RNA; tRNA
Coloring options: