J5_3JBP_009
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- CAAG*CAUAA*UAAUAUGUCCAU*AU*ACGAG
- Length
- 28 nucleotides
- Bulged bases
- 3JBP|1|AA|U|812, 3JBP|1|AA|G|904
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBP|1|AA|C|753
3JBP|1|AA|A|754
3JBP|1|AA|A|755
3JBP|1|AA|G|756
*
3JBP|1|AA|C|796
3JBP|1|AA|A|797
3JBP|1|AA|U|798
3JBP|1|AA|A|799
3JBP|1|AA|A|800
*
3JBP|1|AA|U|807
3JBP|1|AA|A|808
3JBP|1|AA|A|809
3JBP|1|AA|U|810
3JBP|1|AA|A|811
3JBP|1|AA|U|812
3JBP|1|AA|G|813
3JBP|1|AA|U|817
3JBP|1|AA|C|818
3JBP|1|AA|C|821
3JBP|1|AA|A|822
3JBP|1|AA|U|823
*
3JBP|1|AA|A|872
3JBP|1|AA|U|873
*
3JBP|1|AA|A|902
3JBP|1|AA|C|903
3JBP|1|AA|G|904
3JBP|1|AA|A|905
3JBP|1|AA|G|906
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 60S ribosomal protein eL29
- Chain AF
- 60S ribosomal protein uL4
- Chain AL
- 60S ribosomal protein eL13
- Chain AO
- 60S ribosomal protein uL15
- Chain AS
- 60S ribosomal protein eL18
- Chain Ab
- 60S ribosomal protein eL36
Coloring options: