J5_3JBU_006
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GCAAAAUGGUGCC*GGCACG*UC*GAUACCAGC*GGC
- Length
- 33 nucleotides
- Bulged bases
- 3JBU|1|b|U|1758, 3JBU|1|b|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBU|1|b|G|1674
3JBU|1|b|C|1675
3JBU|1|b|A|1676
3JBU|1|b|A|1677
3JBU|1|b|A|1678
3JBU|1|b|A|1679
3JBU|1|b|U|1680
3JBU|1|b|G|1681
3JBU|1|b|G|1682
3JBU|1|b|U|1683
3JBU|1|b|G|1684
3JBU|1|b|C|1685
3JBU|1|b|C|1686
*
3JBU|1|b|G|1702
3JBU|1|b|G|1703
3JBU|1|b|C|1704
3JBU|1|b|A|1705
3JBU|1|b|C|1706
3JBU|1|b|G|1707
*
3JBU|1|b|U|1751
3JBU|1|b|C|1752
*
3JBU|1|b|G|1756
3JBU|1|b|A|1757
3JBU|1|b|U|1758
3JBU|1|b|A|1759
3JBU|1|b|C|1760
3JBU|1|b|C|1761
3JBU|1|b|A|1762
3JBU|1|b|G|1763
3JBU|1|b|C|1764
*
3JBU|1|b|G|1988
3JBU|1|b|G|1989
3JBU|1|b|C|1990
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain d
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L14
- Chain p
- 50S ribosomal protein L19
Coloring options: