J5_3JBU_009
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- CAUGCAAG*CGGACGGG*CAC*GAC*GGCAGCAG
- Length
- 30 nucleotides
- Bulged bases
- 3JBU|1|A|A|109, 3JBU|1|A|A|353
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBU|1|A|C|54
3JBU|1|A|A|55
3JBU|1|A|U|56
3JBU|1|A|G|57
3JBU|1|A|C|58
3JBU|1|A|A|59
3JBU|1|A|A|60
3JBU|1|A|G|61
*
3JBU|1|A|C|106
3JBU|1|A|G|107
3JBU|1|A|G|108
3JBU|1|A|A|109
3JBU|1|A|C|110
3JBU|1|A|G|111
3JBU|1|A|G|112
3JBU|1|A|G|113
*
3JBU|1|A|C|314
3JBU|1|A|A|315
3JBU|1|A|C|316
*
3JBU|1|A|G|337
3JBU|1|A|A|338
3JBU|1|A|C|339
*
3JBU|1|A|G|350
3JBU|1|A|G|351
3JBU|1|A|C|352
3JBU|1|A|A|353
3JBU|1|A|G|354
3JBU|1|A|C|355
3JBU|1|A|A|356
3JBU|1|A|G|357
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
- Chain T
- 30S ribosomal protein S20
- Chain k
- 50S ribosomal protein L14
Coloring options: