J5_3JBV_006
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- AGCGACUUAUAUU*GGUAUAGAC*GUUC*GC*GCGAAUGCU
- Length
- 37 nucleotides
- Bulged bases
- 3JBV|1|b|G|669, 3JBV|1|b|U|1255
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|A|582
3JBV|1|b|G|583
3JBV|1|b|C|584
3JBV|1|b|G|585
3JBV|1|b|A|586
3JBV|1|b|C|587
3JBV|1|b|U|588
3JBV|1|b|U|589
3JBV|1|b|A|590
3JBV|1|b|U|591
3JBV|1|b|A|592
3JBV|1|b|U|593
3JBV|1|b|U|594
*
3JBV|1|b|G|663
3JBV|1|b|G|664
3JBV|1|b|U|665
3JBV|1|b|A|666
3JBV|1|b|U|667
3JBV|1|b|A|668
3JBV|1|b|G|669
3JBV|1|b|A|670
3JBV|1|b|C|671
*
3JBV|1|b|G|809
3JBV|1|b|U|810
3JBV|1|b|U|811
3JBV|1|b|C|812
*
3JBV|1|b|G|1195
3JBV|1|b|C|1196
*
3JBV|1|b|G|1250
3JBV|1|b|C|1251
3JBV|1|b|G|1252
3JBV|1|b|A|1253
3JBV|1|b|A|1254
3JBV|1|b|U|1255
3JBV|1|b|G|1256
3JBV|1|b|C|1257
3JBV|1|b|U|1258
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain e
- 50S ribosomal protein L3
- Chain l
- 50S ribosomal protein L15
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
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