J5_3JCE_003

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACUU*AGACC*GGUUCUC*GAGC*GCGAAUG

Length

29 nucleotides

Bulged bases

3JCE|1|A|U|1255

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|C|584
3JCE|1|A|G|585
3JCE|1|A|A|586
3JCE|1|A|C|587
3JCE|1|A|U|588
3JCE|1|A|U|589
*
3JCE|1|A|A|668
3JCE|1|A|G|669
3JCE|1|A|A|670
3JCE|1|A|C|671
3JCE|1|A|C|672
*
3JCE|1|A|G|808
3JCE|1|A|G|809
3JCE|1|A|U|810
3JCE|1|A|U|811
3JCE|1|A|C|812
3JCE|1|A|U|813
3JCE|1|A|C|814
*
3JCE|1|A|G|1193
3JCE|1|A|A|1194
3JCE|1|A|G|1195
3JCE|1|A|C|1196
*
3JCE|1|A|G|1250
3JCE|1|A|C|1251
3JCE|1|A|G|1252
3JCE|1|A|A|1253
3JCE|1|A|A|1254
3JCE|1|A|U|1255
3JCE|1|A|G|1256

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21