J5_3JCE_004

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUC*GGUGAGUCGACC*GAAA*UACU*AAUCGUAC

Length

33 nucleotides

Bulged bases

3JCE|1|A|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|G|1310
3JCE|1|A|G|1311
3JCE|1|A|U|1312
3JCE|1|A|U|1313
3JCE|1|A|C|1314
*
3JCE|1|A|G|1338
3JCE|1|A|G|1339
3JCE|1|A|U|1340
3JCE|1|A|G|1341
3JCE|1|A|A|1342
3JCE|1|A|G|1343
3JCE|1|A|U|1344
3JCE|1|A|C|1345
3JCE|1|A|G|1346
3JCE|1|A|A|1347
3JCE|1|A|C|1348
3JCE|1|A|C|1349
*
3JCE|1|A|G|1382
3JCE|1|A|A|1383
3JCE|1|A|A|1384
3JCE|1|A|A|1385
*
3JCE|1|A|U|1402
3JCE|1|A|A|1403
3JCE|1|A|C|1404
3JCE|1|A|U|1405
*
3JCE|1|A|A|1597
3JCE|1|A|A|1598
3JCE|1|A|U|1599
3JCE|1|A|C|1600
3JCE|1|A|G|1601
3JCE|1|A|U|1602
3JCE|1|A|A|1603
3JCE|1|A|C|1604

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23