J5_3JCE_006
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUUAG*CGGUCC
- Length
- 40 nucleotides
- Bulged bases
- 3JCE|1|A|A|2060, 3JCE|1|A|A|2062, 3JCE|1|A|A|2448, 3JCE|1|A|G|2502, 3JCE|1|A|U|2506, 3JCE|1|A|U|2609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCE|1|A|G|2057
3JCE|1|A|A|2058
3JCE|1|A|A|2059
3JCE|1|A|A|2060
3JCE|1|A|G|2061
3JCE|1|A|A|2062
3JCE|1|A|C|2063
3JCE|1|A|C|2064
*
3JCE|1|A|G|2446
3JCE|1|A|G|2447
3JCE|1|A|A|2448
3JCE|1|A|U|2449
3JCE|1|A|A|2450
3JCE|1|A|A|2451
3JCE|1|A|C|2452
3JCE|1|A|A|2453
3JCE|1|A|G|2454
*
3JCE|1|A|C|2498
3JCE|1|A|C|2499
3JCE|1|A|U|2500
3JCE|1|A|C|2501
3JCE|1|A|G|2502
3JCE|1|A|A|2503
3JCE|1|A|U|2504
3JCE|1|A|G|2505
3JCE|1|A|U|2506
3JCE|1|A|C|2507
*
3JCE|1|A|G|2582
3JCE|1|A|G|2583
3JCE|1|A|U|2584
3JCE|1|A|U|2585
3JCE|1|A|U|2586
3JCE|1|A|A|2587
3JCE|1|A|G|2588
*
3JCE|1|A|C|2606
3JCE|1|A|G|2607
3JCE|1|A|G|2608
3JCE|1|A|U|2609
3JCE|1|A|C|2610
3JCE|1|A|C|2611
Current chains
- Chain A
- 23 ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 8
- Transfer RNA; tRNA
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
- Chain x
- Elongation factor 4
Coloring options: