J5_3JCJ_009
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUUAG*CGGUCC
- Length
- 38 nucleotides
- Bulged bases
- 3JCJ|1|A|A|2062, 3JCJ|1|A|A|2448, 3JCJ|1|A|U|2449, 3JCJ|1|A|U|2585, 3JCJ|1|A|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JCJ|1|A|G|2057
3JCJ|1|A|A|2058
3JCJ|1|A|A|2059
3JCJ|1|A|A|2060
3JCJ|1|A|G|2061
3JCJ|1|A|A|2062
3JCJ|1|A|C|2063
3JCJ|1|A|C|2064
*
3JCJ|1|A|G|2446
3JCJ|1|A|G|2447
3JCJ|1|A|A|2448
3JCJ|1|A|U|2449
3JCJ|1|A|A|2450
3JCJ|1|A|A|2451
3JCJ|1|A|C|2452
3JCJ|1|A|A|2453
3JCJ|1|A|G|2454
*
3JCJ|1|A|C|2498
3JCJ|1|A|C|2499
3JCJ|1|A|U|2500
3JCJ|1|A|C|2501
3JCJ|1|A|G|2502
3JCJ|1|A|A|2503
3JCJ|1|A|U|2504
3JCJ|1|A|G|2505
3JCJ|1|A|U|2506
*
3JCJ|1|A|G|2583
3JCJ|1|A|U|2584
3JCJ|1|A|U|2585
3JCJ|1|A|U|2586
3JCJ|1|A|A|2587
3JCJ|1|A|G|2588
*
3JCJ|1|A|C|2606
3JCJ|1|A|G|2607
3JCJ|1|A|G|2608
3JCJ|1|A|U|2609
3JCJ|1|A|C|2610
3JCJ|1|A|C|2611
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain C
- 50S ribosomal protein L3
- Chain D
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L15
- Chain L
- 50S ribosomal protein L16
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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