J5_3OW2_001
3D structure
- PDB id
- 3OW2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- UGAUGAAG*CGAAUG*CU*ACAA*UGA
- Length
- 23 nucleotides
- Bulged bases
- 3OW2|1|0|U|46, 3OW2|1|0|C|130
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_3OW2_001 not in the Motif Atlas
- Homologous match to J5_4V9F_001
- Geometric discrepancy: 0.036
- The information below is about J5_4V9F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_99180.1
- Basepair signature
- cWW-F-F-cHW-cWW-tSH-tHH-F-tHS-F-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
3OW2|1|0|U|43
3OW2|1|0|G|44
3OW2|1|0|A|45
3OW2|1|0|U|46
3OW2|1|0|G|47
3OW2|1|0|A|48
3OW2|1|0|A|49
3OW2|1|0|G|50
*
3OW2|1|0|C|111
3OW2|1|0|G|112
3OW2|1|0|A|113
3OW2|1|0|A|114
3OW2|1|0|U|115
3OW2|1|0|G|116
*
3OW2|1|0|C|124
3OW2|1|0|U|125
*
3OW2|1|0|A|129
3OW2|1|0|C|130
3OW2|1|0|A|131
3OW2|1|0|A|132
*
3OW2|1|0|U|146
3OW2|1|0|G|147
3OW2|1|0|A|148
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L39e
- Chain L
- 50S ribosomal protein L15e
- Chain R
- 50S ribosomal protein L23P
- Chain Z
- 50S ribosomal protein L37e
Coloring options: