J5_4CSU_005
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 4CSU|1|B|A|2448, 4CSU|1|B|U|2585, 4CSU|1|B|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4CSU|1|B|G|2057
4CSU|1|B|A|2058
4CSU|1|B|A|2059
4CSU|1|B|A|2060
4CSU|1|B|G|2061
4CSU|1|B|A|2062
4CSU|1|B|C|2063
4CSU|1|B|C|2064
*
4CSU|1|B|G|2446
4CSU|1|B|G|2447
4CSU|1|B|A|2448
4CSU|1|B|U|2449
4CSU|1|B|A|2450
4CSU|1|B|A|2451
4CSU|1|B|C|2452
4CSU|1|B|A|2453
*
4CSU|1|B|U|2500
4CSU|1|B|C|2501
4CSU|1|B|G|2502
4CSU|1|B|A|2503
4CSU|1|B|U|2504
4CSU|1|B|G|2505
4CSU|1|B|U|2506
*
4CSU|1|B|G|2583
4CSU|1|B|U|2584
4CSU|1|B|U|2585
4CSU|1|B|U|2586
4CSU|1|B|A|2587
4CSU|1|B|G|2588
*
4CSU|1|B|C|2606
4CSU|1|B|G|2607
4CSU|1|B|G|2608
4CSU|1|B|U|2609
4CSU|1|B|C|2610
4CSU|1|B|C|2611
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 3
- 50S RIBOSOMAL PROTEIN L32
- Chain 9
- GTPASE OBGE/CGTA
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain M
- 50S RIBOSOMAL PROTEIN L16
Coloring options: